Sequencing Datasets

Download and analyze sequencing datasets for greater insight into a range of applications. Bases2Fastq Software generated all FASTQ files from Element AVITI™ System bases files.

2 x 300 Sequencing 

Application Chemistry Dataset Key Resource
16S amplicon Cloudbreak™ ZymoBIOMICs Microbial Community Standard  Not applicable
B-cell receptor (BCR)  Cloudbreak Spleen and PMBC  Not applicable
Human WGS  Cloudbreak Human reference genome with the Adept™ Workflow  Whole-Genome Sequencing web page 
Human WGS  Cloudbreak Human reference genome with the Elevate™ Workflow  Whole-Genome Sequencing web page 

RNA Sequencing 

Application 

Chemistry 

Dataset 

Key Resource 

Bulk RNA-Seq 

Cloudbreak™ 

Universal Human Reference RNA with an ERCC spike-in

Not applicable 

Single-cell 3’ gene expression 

Version 1 

10x Genomics Chromium Single Cell 3’

AVITI and 10x Genomics single-cell application note 

 

Whole-transcriptome gene expression 

Cloudbreak 

10x Genomics Chromium Single Cell Gene Expression Flex (human PBMC cells)

Single-cell sequencing and AVITI blog post 

 

Targeted Sequencing 

Application 

Chemistry 

Dataset 

Key Resource 

Human WES 

Cloudbreak 

Twist Bioscience Exome 2.0 (NA12878)

Cost-effective sequencing to understand genetic disease blog post 

 

Whole-Genome Sequencing 

Application 

Chemistry 

Dataset 

Key Resource 

Bacterial WGS 

Cloudbreak 

Microbial genome reference set

Human and microbial genomes with KAPA & AVITI application note 

Human WGS 

Cloudbreak 

Human reference genomes

Accurate human genome analysis with Avidity Sequencing™ preprint (results) 

Human WGS 

Version 1 

Human reference genome 

Not applicable 

Human

methylation WGS 

Cloudbreak 

NEBNext Enzymatic Methyl-seq (NA12878) 

Less expensive methylation detection blog post 

Human

methylation WGS 

Version 1 

NEBNext Enzymatic Methyl-seq (NA12878)

Less expensive methylation detection blog post (results)